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GATA transcription factor
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<h2 id="molecular-structure-of-the-gata-transcription-factor-family">Molecular structure of the GATA transcription factor family</h2> <p>In non-vertebrates, the GATA genes are located close together on the chromosomes. Due to evolution, these genes in humans moved apart and are separated into 6 distinct chromosomal regions.<a class="footnote-ref" id="fnref:9" href="#fn:9"><sup>9</sup></a>To regulate transcription of DNA, GATA transcription factors containing the class IV zinc finger motif look for GATA sites in DNA with two conserved zinc finger involved in long range DNA interactions.<a class="footnote-ref" id="fnref:10" href="#fn:10"><sup>10</sup></a><a class="footnote-ref" id="fnref:11" href="#fn:11"><sup>11</sup></a> In non-vertebrates, GATA transcription factors contain one zinc finger DNA binding domain (ZNI). In humans, GATA transcription factors contain two zinc finger DNA binding domains (ZNI and ZNII) which looks for adenine or thymine before the GATA sequence and adenine or guanine after as shown by the schematic: (A/T)GATA(A/G).<a class="footnote-ref" id="fnref:12" href="#fn:12"><sup>12</sup></a> Generally, ZNI and ZNII follow the sequence: CX2CX17–18CX2C.<a class="footnote-ref" id="fnref:13" href="#fn:13"><sup>13</sup></a><a class="footnote-ref" id="fnref:14" href="#fn:14"><sup>14</sup></a> 70% of the regions in the zinc finger domains are the same while the terminal amino and carboxyl domains can change.<a class="footnote-ref" id="fnref:15" href="#fn:15"><sup>15</sup></a> </p> <h2 id="genes">Genes</h2> <p>In humans: </p> <ul><li><a href="/facts/GATA1/VnecpBf2">GATA1</a> (see also <i><a href="https://www.genenames.org/tools/search/#!/genes?query=GATA1">GATA1</a></i>)</li> <li><a href="/facts/GATA2/weXBRFRt">GATA2</a> (see also <i><a href="https://www.genenames.org/tools/search/#!/genes?query=GATA2">GATA2</a></i>)</li> <li><a href="/facts/GATA3/nAG0eaF8">GATA3</a> (see also <i><a href="https://www.genenames.org/tools/search/#!/genes?query=GATA3">GATA3</a></i>)</li> <li><a href="/facts/GATA4/Q6Kt1zGj">GATA4</a> (see also <i><a href="https://www.genenames.org/tools/search/#!/genes?query=GATA4">GATA4</a></i>)</li> <li><a href="/facts/GATA5/7ep8pale">GATA5</a> (see also <i><a href="https://www.genenames.org/tools/search/#!/genes?query=GATA5">GATA5</a></i>)</li> <li><a href="/facts/GATA6/97pncrbl">GATA6</a> (see also <i><a href="https://www.genenames.org/tools/search/#!/genes?query=GATA6">GATA6</a></i>)</li></ul> <p>In yeast: </p> <ul><li>GLN3 (see also <a href="https://www.yeastgenome.org/locus/S000000842"><i>GLN3</i></a>)</li> <li>GAT1 (see also <a href="https://www.yeastgenome.org/locus/S000001873"><i>GAT1</i></a>)</li> <li>DAL80 (see also <a href="https://www.yeastgenome.org/locus/DAL80"><i>DAL80</i></a>)</li> <li>GZF3 (see also <a href="https://www.yeastgenome.org/locus/S000003646"><i>GZF3</i></a>)</li></ul> <h2 id="role-in-breast-cancer">Role in breast cancer</h2> <p>Despite GATA’s influence on endocrine organs and cell development, they have a complex relation to the development and growth of breast cancer. Its immediate influence is not yet known, its high risk for mutation however, makes determining the immediate influence of paramount importance in battling breast cancer.<a class="footnote-ref" id="fnref:16" href="#fn:16"><sup>16</sup></a> </p><p>Some research that has been done on the GATA transcription factor for its role in the development of breast cancer suggests that a specific GATA transcription factor GATA3 can actually inhibit further growth of breast cancer cells.<a class="footnote-ref" id="fnref:17" href="#fn:17"><sup>17</sup></a> The complete mechanism in which this happens is still not clear.<a class="footnote-ref" id="fnref:18" href="#fn:18"><sup>18</sup></a> However, research has suggested that the GATA transcription factor creates an unfavorable chemical environment for the breast cancer tumor cells which inhibits the progression of these cells.<a class="footnote-ref" id="fnref:19" href="#fn:19"><sup>19</sup></a> One way that has been suggested is that the GATA transcription factor lowers the level of adenosine triphosphate (ATP) in the cell.<a class="footnote-ref" id="fnref:20" href="#fn:20"><sup>20</sup></a> This creates an unfavorable chemical environment for the breast cancer cells because usually they require high levels of ATP to survive.<a class="footnote-ref" id="fnref:21" href="#fn:21"><sup>21</sup></a> In addition, research has suggested that there is a specific gene called the TRP1 that is expressed in breast cancer cells and the GATA3 transcription factor plays a role in regulating this gene.<a class="footnote-ref" id="fnref:22" href="#fn:22"><sup>22</sup></a> </p> <h2 id="external-links">External links</h2> <ul><li><a href="https://meshb.nlm.nih.gov/record/ui?name=GATA+transcription+factors">GATA+transcription+factors</a> at the U.S. National Library of Medicine <a href="/facts/Medical_Subject_Headings/C57g2JuF">Medical Subject Headings</a> (MeSH)</li></ul> <h2 id="references">References</h2> <ol> <li id="fn:1"><p>Ko LJ, Engel JD (July 1993). "DNA-binding specificities of the GATA transcription factor family". Molecular and Cellular Biology. 13 (7): 4011–4022. doi:10.1128/mcb.13.7.4011. PMC 359950. PMID 8321208. <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC359950" target="_blank">https://www.ncbi.nlm.nih.gov/pmc/articles/PMC359950</a> <a href="#fnref:1" class="footnote-back-ref">↩</a></p></li> <li id="fn:2"><p>Lentjes, Marjolein HFM; Niessen, Hanneke EC; Akiyama, Yoshimitsu; de Bruïne, Adriaan P; Melotte, Veerle; van Engeland, Manon (2016). "The emerging role of GATA transcription factors in development and disease". Expert Reviews in Molecular Medicine. 18: e3. doi:10.1017/erm.2016.2. ISSN 1462-3994. PMC 4836206. PMID 26953528. <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4836206" target="_blank">https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4836206</a> <a href="#fnref:2" class="footnote-back-ref">↩</a></p></li> <li id="fn:3"><p>Lowry, Jason A.; Atchley, William R. (17 September 1999). "Molecular Evolution of the GATA Family of Transcription Factors: Conservation Within the DNA-Binding Domain". Journal of Molecular Evolution. 50 (2): 103–115. doi:10.1007/s002399910012. PMID 10684344 – via Springer Link. <a href="/wiki/Doi_(identifier)" target="_blank">/wiki/Doi_(identifier)</a> <a href="#fnref:3" class="footnote-back-ref">↩</a></p></li> <li id="fn:4"><p>Lentjes, Marjolein HFM; Niessen, Hanneke EC; Akiyama, Yoshimitsu; de Bruïne, Adriaan P; Melotte, Veerle; van Engeland, Manon (2016). "The emerging role of GATA transcription factors in development and disease". Expert Reviews in Molecular Medicine. 18: e3. doi:10.1017/erm.2016.2. ISSN 1462-3994. PMC 4836206. PMID 26953528. <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4836206" target="_blank">https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4836206</a> <a href="#fnref:4" class="footnote-back-ref">↩</a></p></li> <li id="fn:5"><p>Lentjes, Marjolein HFM; Niessen, Hanneke EC; Akiyama, Yoshimitsu; de Bruïne, Adriaan P; Melotte, Veerle; van Engeland, Manon (2016). "The emerging role of GATA transcription factors in development and disease". Expert Reviews in Molecular Medicine. 18: e3. doi:10.1017/erm.2016.2. ISSN 1462-3994. PMC 4836206. PMID 26953528. <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4836206" target="_blank">https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4836206</a> <a href="#fnref:5" class="footnote-back-ref">↩</a></p></li> <li id="fn:6"><p>Lentjes, Marjolein HFM; Niessen, Hanneke EC; Akiyama, Yoshimitsu; de Bruïne, Adriaan P; Melotte, Veerle; van Engeland, Manon (2016). "The emerging role of GATA transcription factors in development and disease". Expert Reviews in Molecular Medicine. 18: e3. doi:10.1017/erm.2016.2. ISSN 1462-3994. PMC 4836206. PMID 26953528. <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4836206" target="_blank">https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4836206</a> <a href="#fnref:6" class="footnote-back-ref">↩</a></p></li> <li id="fn:7"><p>Lentjes, Marjolein HFM; Niessen, Hanneke EC; Akiyama, Yoshimitsu; de Bruïne, Adriaan P; Melotte, Veerle; van Engeland, Manon (2016). "The emerging role of GATA transcription factors in development and disease". Expert Reviews in Molecular Medicine. 18: e3. doi:10.1017/erm.2016.2. ISSN 1462-3994. PMC 4836206. PMID 26953528. <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4836206" target="_blank">https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4836206</a> <a href="#fnref:7" class="footnote-back-ref">↩</a></p></li> <li id="fn:8"><p>Viger RS, Guittot SM, Anttonen M, Wilson DB, Heikinheimo M (April 2008). "Role of the GATA family of transcription factors in endocrine development, function, and disease". Molecular Endocrinology. 22 (4): 781–798. doi:10.1210/me.2007-0513. PMC 2276466. PMID 18174356. <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2276466" target="_blank">https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2276466</a> <a href="#fnref:8" class="footnote-back-ref">↩</a></p></li> <li id="fn:9"><p>Lentjes, Marjolein HFM; Niessen, Hanneke EC; Akiyama, Yoshimitsu; de Bruïne, Adriaan P; Melotte, Veerle; van Engeland, Manon (2016). "The emerging role of GATA transcription factors in development and disease". Expert Reviews in Molecular Medicine. 18: e3. doi:10.1017/erm.2016.2. ISSN 1462-3994. PMC 4836206. PMID 26953528. <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4836206" target="_blank">https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4836206</a> <a href="#fnref:9" class="footnote-back-ref">↩</a></p></li> <li id="fn:10"><p>Lowry, Jason A.; Atchley, William R. (17 September 1999). "Molecular Evolution of the GATA Family of Transcription Factors: Conservation Within the DNA-Binding Domain". Journal of Molecular Evolution. 50 (2): 103–115. doi:10.1007/s002399910012. PMID 10684344 – via Springer Link. <a href="/wiki/Doi_(identifier)" target="_blank">/wiki/Doi_(identifier)</a> <a href="#fnref:10" class="footnote-back-ref">↩</a></p></li> <li id="fn:11"><p>Chen, Yongheng; Bates, Darren L.; Dey, Raja; Chen, Po-Han; Machado, Ana Carolina Dantas; Laird-Offringa, Ite A.; Rohs, Remo; Chen, Lin (November 2012). "DNA Binding by GATA Transcription Factor Suggests Mechanisms of DNA Looping and Long-Range Gene Regulation". Cell Reports. 2 (5): 1197–1206. doi:10.1016/j.celrep.2012.10.012. PMC 3978094. PMID 23142663. <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3978094" target="_blank">https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3978094</a> <a href="#fnref:11" class="footnote-back-ref">↩</a></p></li> <li id="fn:12"><p>Lentjes, Marjolein HFM; Niessen, Hanneke EC; Akiyama, Yoshimitsu; de Bruïne, Adriaan P; Melotte, Veerle; van Engeland, Manon (2016). "The emerging role of GATA transcription factors in development and disease". Expert Reviews in Molecular Medicine. 18: e3. doi:10.1017/erm.2016.2. ISSN 1462-3994. PMC 4836206. PMID 26953528. <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4836206" target="_blank">https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4836206</a> <a href="#fnref:12" class="footnote-back-ref">↩</a></p></li> <li id="fn:13"><p>Lentjes, Marjolein HFM; Niessen, Hanneke EC; Akiyama, Yoshimitsu; de Bruïne, Adriaan P; Melotte, Veerle; van Engeland, Manon (2016). "The emerging role of GATA transcription factors in development and disease". Expert Reviews in Molecular Medicine. 18: e3. doi:10.1017/erm.2016.2. ISSN 1462-3994. PMC 4836206. PMID 26953528. <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4836206" target="_blank">https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4836206</a> <a href="#fnref:13" class="footnote-back-ref">↩</a></p></li> <li id="fn:14"><p>Lowry, Jason A.; Atchley, William R. (17 September 1999). "Molecular Evolution of the GATA Family of Transcription Factors: Conservation Within the DNA-Binding Domain". Journal of Molecular Evolution. 50 (2): 103–115. doi:10.1007/s002399910012. PMID 10684344 – via Springer Link. <a href="/wiki/Doi_(identifier)" target="_blank">/wiki/Doi_(identifier)</a> <a href="#fnref:14" class="footnote-back-ref">↩</a></p></li> <li id="fn:15"><p>Lentjes, Marjolein HFM; Niessen, Hanneke EC; Akiyama, Yoshimitsu; de Bruïne, Adriaan P; Melotte, Veerle; van Engeland, Manon (2016). "The emerging role of GATA transcription factors in development and disease". Expert Reviews in Molecular Medicine. 18: e3. doi:10.1017/erm.2016.2. ISSN 1462-3994. PMC 4836206. PMID 26953528. <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4836206" target="_blank">https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4836206</a> <a href="#fnref:15" class="footnote-back-ref">↩</a></p></li> <li id="fn:16"><p>Du F, Yuan P, Wang T, Zhao J, Zhao Z, Luo Y, Xu B (November 2015). "The Significance and Therapeutic Potential of GATA3 Expression and Mutation in Breast Cancer: A Systematic Review". Medicinal Research Reviews. 35 (6): 1300–1315. doi:10.1002/med.21362. PMID 26313026. S2CID 11668034. <a href="/wiki/Doi_(identifier)" target="_blank">/wiki/Doi_(identifier)</a> <a href="#fnref:16" class="footnote-back-ref">↩</a></p></li> <li id="fn:17"><p>Li M, Qi Y, Chen M, Wang Z, Zeng D, Xiao Y, et al. (2019). "GATA Binding Protein 3 Boosts Extracellular ATP Hydrolysis and Inhibits Metastasis of Breast Cancer by Up-regulating Ectonucleoside Triphosphate Diphosphohydrolase 3". International Journal of Biological Sciences. 15 (12): 2522–2537. doi:10.7150/ijbs.35563. PMC 6854379. PMID 31754326. <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6854379" target="_blank">https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6854379</a> <a href="#fnref:17" class="footnote-back-ref">↩</a></p></li> <li id="fn:18"><p>Li M, Qi Y, Chen M, Wang Z, Zeng D, Xiao Y, et al. (2019). "GATA Binding Protein 3 Boosts Extracellular ATP Hydrolysis and Inhibits Metastasis of Breast Cancer by Up-regulating Ectonucleoside Triphosphate Diphosphohydrolase 3". International Journal of Biological Sciences. 15 (12): 2522–2537. doi:10.7150/ijbs.35563. PMC 6854379. PMID 31754326. <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6854379" target="_blank">https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6854379</a> <a href="#fnref:18" class="footnote-back-ref">↩</a></p></li> <li id="fn:19"><p>Li M, Qi Y, Chen M, Wang Z, Zeng D, Xiao Y, et al. (2019). "GATA Binding Protein 3 Boosts Extracellular ATP Hydrolysis and Inhibits Metastasis of Breast Cancer by Up-regulating Ectonucleoside Triphosphate Diphosphohydrolase 3". International Journal of Biological Sciences. 15 (12): 2522–2537. doi:10.7150/ijbs.35563. PMC 6854379. PMID 31754326. <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6854379" target="_blank">https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6854379</a> <a href="#fnref:19" class="footnote-back-ref">↩</a></p></li> <li id="fn:20"><p>Li M, Qi Y, Chen M, Wang Z, Zeng D, Xiao Y, et al. (2019). "GATA Binding Protein 3 Boosts Extracellular ATP Hydrolysis and Inhibits Metastasis of Breast Cancer by Up-regulating Ectonucleoside Triphosphate Diphosphohydrolase 3". International Journal of Biological Sciences. 15 (12): 2522–2537. doi:10.7150/ijbs.35563. PMC 6854379. PMID 31754326. <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6854379" target="_blank">https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6854379</a> <a href="#fnref:20" class="footnote-back-ref">↩</a></p></li> <li id="fn:21"><p>Li M, Qi Y, Chen M, Wang Z, Zeng D, Xiao Y, et al. (2019). "GATA Binding Protein 3 Boosts Extracellular ATP Hydrolysis and Inhibits Metastasis of Breast Cancer by Up-regulating Ectonucleoside Triphosphate Diphosphohydrolase 3". International Journal of Biological Sciences. 15 (12): 2522–2537. doi:10.7150/ijbs.35563. PMC 6854379. PMID 31754326. <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6854379" target="_blank">https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6854379</a> <a href="#fnref:21" class="footnote-back-ref">↩</a></p></li> <li id="fn:22"><p>Chen JQ, Bao Y, Lee J, Murray JL, Litton JK, Xiao L, et al. (October 2013). "Prognostic value of the trichorhinophalangeal syndrome-1 (TRPS-1), a GATA family transcription factor, in early-stage breast cancer". Annals of Oncology. 24 (10): 2534–2542. doi:10.1093/annonc/mdt190. PMC 3784330. PMID 23729783. <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3784330" target="_blank">https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3784330</a> <a href="#fnref:22" class="footnote-back-ref">↩</a></p></li> </ol>