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Critical Assessment of Prediction of Interactions
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<h2 id="see-also">See also</h2> <ul><li><a href="/facts/Critical_Assessment_of_Techniques_for_Protein_Structure_Prediction/A7fWoph9">Critical Assessment of Techniques for Protein Structure Prediction</a> (CASP) — a similar exercise in the field of protein structure prediction</li> <li><a href="/facts/Critical_Assessment_of_Function_Annotation/pyWxje3w">Critical Assessment of Functional Annotation</a> (CAFA)</li></ul> <h2 id="external-links">External links</h2> <ul><li><a href="https://www.ebi.ac.uk/pdbe/complex-pred/capri/">Official website</a></li> <li><a href="http://rosettadesigngroup.com/blog/535/capri-state-of-protein-protein-docking/">CAPRI or: What is the State of Protein-Protein Docking?</a> <a href="https://web.archive.org/web/20111112145422/http://rosettadesigngroup.com/blog/535/capri-state-of-protein-protein-docking/">Archived</a> 2011-11-12 at the <a href="/facts/Wayback_Machine/nmQ3a6JC">Wayback Machine</a></li></ul> <h3>List of predictions servers participating in CAPRI</h3> <ul><li><a href="http://cluspro.bu.edu">ClusPro</a></li> <li><a href="http://vakser.bioinformatics.ku.edu/resources/gramm/grammx/">GRAMM-X</a></li> <li><a href="http://bioinfo3d.cs.tau.ac.il/FireDock">FireDock</a></li> <li><a href="http://haddock.chem.uu.nl">HADDOCK</a> <a href="https://web.archive.org/web/20200129092748/http://haddock.chem.uu.nl/">Archived</a> 2020-01-29 at the <a href="/facts/Wayback_Machine/nmQ3a6JC">Wayback Machine</a> — High-Ambiguity-Driven protein–protein DOCKing</li> <li><a href="https://life.bsc.es/pid/pydockweb/">pyDockWEB</a> — Structural prediction of protein–protein interactions</li> <li><a href="http://bioinfo3d.cs.tau.ac.il/PatchDock">PatchDock</a></li> <li><a href="http://structure.pitt.edu/servers/smoothdock/">SmoothDock</a></li> <li><a href="http://www.sbg.bio.ic.ac.uk/~3dgarden/">3D-Garden</a> — Global and Restrained Docking Exploration Nexus</li> <li><a href="https://bmm.crick.ac.uk/~svc-bmm-swarmdock/index.html">SwarmDock</a> <a href="https://web.archive.org/web/20210419103715/https://bmm.crick.ac.uk/~svc-bmm-swarmdock/index.html">Archived</a> 2021-04-19 at the <a href="/facts/Wayback_Machine/nmQ3a6JC">Wayback Machine</a></li> <li><a href="http://clsb.ices.utexas.edu/web/dock_details.html">DOCK/PIE</a></li> <li><a href="http://www.bioinformatics.org/spider/">SPIDER</a> - Scoring Protein-Protein Interactions</li></ul> <h2 id="references">References</h2> <ol> <li id="fn:1"><p>Joël Janin; Kim Henrick; John Moult; Lynn Ten Eyck; Michael J E Sternberg; Sandor Vajda; Ilya Vakser; Shoshana Wodak (1 July 2003). "CAPRI: a Critical Assessment of PRedicted Interactions". Proteins. 52 (1): 2–9. CiteSeerX 10.1.1.461.3355. doi:10.1002/PROT.10381. ISSN 1097-0134. PMID 12784359. S2CID 31489448. Wikidata Q28208450. <a href="/wiki/Shoshana_Wodak" target="_blank">/wiki/Shoshana_Wodak</a> <a href="#fnref:1" class="footnote-back-ref">↩</a></p></li> </ol>