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Eubacterium
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<h2 id="phylogeny">Phylogeny</h2> <p>The currently accepted taxonomy is based on the <a href="/facts/List_of_Prokaryotic_names_with_Standing_in_Nomenclature/9djL152L">List of Prokaryotic names with Standing in Nomenclature</a> (LPSN)<a class="footnote-ref" id="fnref:1" href="#fn:1"><sup>1</sup></a> and <a href="/facts/National_Center_for_Biotechnology_Information/6Xj5wCbu">National Center for Biotechnology Information</a> (NCBI)<a class="footnote-ref" id="fnref:2" href="#fn:2"><sup>2</sup></a> </p> <table><tbody><tr><th colspan="1">16S rRNA based <a href="/facts/The_All-Species_Living_Tree_Project/txMadzJv">LTP</a>_10_2024<a class="footnote-ref" id="fnref:3" href="#fn:3"><sup>3</sup></a><a class="footnote-ref" id="fnref:4" href="#fn:4"><sup>4</sup></a><a class="footnote-ref" id="fnref:5" href="#fn:5"><sup>5</sup></a></th><th colspan="1">120 marker proteins based <a href="/facts/Genome_Taxonomy_Database/hnEgBvVx">GTDB</a> 09-RS220<a class="footnote-ref" id="fnref:6" href="#fn:6"><sup>6</sup></a><a class="footnote-ref" id="fnref:7" href="#fn:7"><sup>7</sup></a><a class="footnote-ref" id="fnref:8" href="#fn:8"><sup>8</sup></a></th></tr><tr><td><table><tbody><tr><td></td><td rowspan="2"><table><tbody><tr><td></td><td rowspan="2"><p><i><a href="/facts/Pseudoramibacter/btTSI5vD">Pseudoramibacter</a></i></p></td></tr><tr><td></td></tr><tr><td></td><td rowspan="2"><table><tbody><tr><td></td><td rowspan="2"><p><i><a href="/facts/Acetobacterium/v5kVlFfK">Acetobacterium</a></i></p></td></tr><tr><td></td></tr><tr><td></td><td rowspan="2"><table><tbody><tr><td><i>Eubacterium</i> s.s.</td><td rowspan="2"><table><tbody><tr><td></td><td rowspan="2"><table><tbody><tr><td></td><td rowspan="2"><p><i><a href="/facts/Eubacterium_aggregans/obMAaejk">E. aggregans</a></i> Mechichi et al. 2000</p></td></tr><tr><td></td></tr><tr><td></td><td rowspan="2"><p><i><a href="/facts/Eubacterium_barkeri/Nnk14Jpx">E. barkeri</a></i> (Stadtman et al. 1972) Collins et al. 1994</p></td></tr><tr><td></td></tr></tbody></table></td></tr><tr><td></td></tr><tr><td></td><td rowspan="2"><table><tbody><tr><td></td><td rowspan="2"><p><i>E. maltosivorans</i> Feng et al. 2018</p></td></tr><tr><td></td></tr><tr><td></td><td rowspan="2"><table><tbody><tr><td></td><td rowspan="2"><p><i>E. callanderi</i> Mountfort et al. 1988</p></td></tr><tr><td></td></tr><tr><td></td><td rowspan="2"><p><i>E. limosum</i> (Eggerth 1935) Prévot 1938</p></td></tr><tr><td></td></tr></tbody></table></td></tr><tr><td></td></tr></tbody></table></td></tr><tr><td></td></tr></tbody></table></td></tr><tr><td></td></tr></tbody></table></td></tr><tr><td></td></tr></tbody></table></td></tr><tr><td></td></tr></tbody></table></td></tr><tr><td></td></tr></tbody></table></td><td><table><tbody><tr><td></td><td rowspan="2"><table><tbody><tr><td></td><td rowspan="2"><table><tbody><tr><td></td><td rowspan="2"><p><i><a href="/facts/Pseudoramibacter/btTSI5vD">Pseudoramibacter</a></i></p></td></tr><tr><td></td></tr><tr><td></td><td rowspan="2"><table><tbody><tr><td><i>Eubacterium</i></td><td rowspan="2"><table><tbody><tr><td></td><td rowspan="2"><p><i><a href="/facts/Eubacterium_aggregans/obMAaejk">E. aggregans</a></i></p></td></tr><tr><td></td></tr><tr><td></td><td rowspan="2"><p><i><a href="/facts/Eubacterium_barkeri/Nnk14Jpx">E. barkeri</a></i></p></td></tr><tr><td></td></tr></tbody></table></td></tr><tr><td>species‑group 2</td></tr></tbody></table></td></tr><tr><td></td></tr></tbody></table></td></tr><tr><td></td></tr><tr><td></td><td rowspan="2"><table><tbody><tr><td></td><td rowspan="2"><p><i><a href="/facts/Acetobacterium/v5kVlFfK">Acetobacterium</a></i></p></td></tr><tr><td></td></tr><tr><td></td><td rowspan="2"><table><tbody><tr><td><i>Eubacterium</i> s.s.</td><td rowspan="2"><table><tbody><tr><td></td><td rowspan="2"><p><i>E. maltosivorans</i></p></td></tr><tr><td></td></tr><tr><td></td><td rowspan="2"><table><tbody><tr><td></td><td rowspan="2"><p><i>E. callanderi</i></p></td></tr><tr><td></td></tr><tr><td></td><td rowspan="2"><p><i>E. limosum</i></p></td></tr><tr><td></td></tr></tbody></table></td></tr><tr><td></td></tr></tbody></table></td></tr><tr><td></td></tr></tbody></table></td></tr><tr><td></td></tr></tbody></table></td></tr><tr><td></td></tr></tbody></table></td></tr><tr><td></td></tr></tbody></table></td></tr></tbody></table> <table><tbody><tr><th colspan="1">Species located elsewhere on the <a href="/facts/The_All-Species_Living_Tree_Project/txMadzJv">LTP</a> and <a href="/facts/Genome_Taxonomy_Database/hnEgBvVx">GTDB</a> phylogenetic trees:</th><th colspan="1">Orphaned species</th></tr><tr><td><ul><li>"<i>Ca.</i> E. avistercoris" Gilroy et al. 2021</li><li><i>E. brachy</i> Holdeman et al. 1980</li><li><i>E. cellulosolvens</i> (Bryant et al. 1958) Holdeman & Moore 1972</li><li><i>E. coprostanoligenes</i> Freier et al. 1994</li><li>"<i>Ca.</i> E. faecale" Gilroy et al. 2021</li><li>"<i>Ca.</i> E. faecavium" Gilroy et al. 2021</li><li>"<i>Ca.</i> E. faecigallinarum" Gilroy et al. 2021</li><li>"<i>Ca.</i> E. faecipullorum" Gilroy et al. 2021</li><li><i>E. hominis</i> Liu et al. 2022</li><li><i>E. infirmum</i> Cheeseman et al. 1996</li><li><i>E. multiforme</i> (Distaso 1911) Holdeman & Moore 1970</li><li><i><a href="/facts/Eubacterium_nodatum/oru7AXth">E. nodatum</a></i> Holdeman et al. 1980</li><li><i><a href="/facts/Eubacterium_oxidoreducens/YfrTKBkw">E. oxidoreducens</a></i> corrig. Krumholz & Bryant 1986</li><li><i>E. plexicaudatum</i> Wilkins, Fulghum & Wilkins 1974</li><li><i>E. pyruvativorans</i> Wallace et al. 2003</li><li><i>E. ramulus</i> Moore, Johnson &Holdeman 1976</li><li><i>E. ruminantium</i> Bryant 1959</li><li><i>E. saphenum</i> corrig. Uematsu et al. 1993</li><li>"<i>E. segne</i>" Liu et al. 2021</li><li><i>E. siraeum</i> Moore, Johnson & Holdeman 1976</li><li><i>E. sulci</i> (Cato, Moore & Moore 1985) Jalava & Eerola 1999</li><li><i>E. tardum</i> Cheeseman et al. 1996 [<i>E. minutum</i> Poco et al. 1996 non (Hauduroy et al. 1937) Prévot 1938]</li><li><i>E. tenue</i> (Bergey et al. 1923) Holdeman & Moore 1970</li><li><i>E. uniforme</i> van Gylswyk & van der Toorn 1985</li><li><i>E. ventriosum</i> (Tissier 1908) Prévot 1938</li><li><i>E. xylanophilum</i> van Gylswyk & van der Toorn 1985</li><li><i>E. yurii</i> Margaret & Krywolap 1986</li></ul></td><td><ul><li>"<i>E. acidiformans</i>" Huang et al. 2024</li><li>"<i>E. albensis</i>" Wallace et al. 1998</li><li><i>E. album</i> Liu et al. 2024</li><li>"<i>E. difficile</i>" Liu et al. 2021</li><li>"<i>E. pectinii</i>" Mountfort et al. 1993</li><li>"<i>E. rangiferina</i>" Sundset et al. 2008</li><li>"<i>E. thermomarinus</i>" Pledger et al. 1995</li></ul></td></tr></tbody></table> <h2 id="see-also">See also</h2> <ul><li><a href="/facts/List_of_bacterial_orders/ujvD930b">List of bacterial orders</a></li> <li><a href="/facts/List_of_bacteria_genera/a25ukgSb">List of bacteria genera</a></li></ul> <h2 id="references">References</h2> <ol> <li id="fn:1"><p>J.P. Euzéby. "Eubacterium". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09. <a href="https://lpsn.dsmz.de/genus/eubacterium" target="_blank">https://lpsn.dsmz.de/genus/eubacterium</a> <a href="#fnref:1" class="footnote-back-ref">↩</a></p></li> <li id="fn:2"><p>Sayers; et al. "Eubacterium". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09. <a href="https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=1730&lvl=3&lin=f&keep=1&srchmode=1&unlock" target="_blank">https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=1730&lvl=3&lin=f&keep=1&srchmode=1&unlock</a> <a href="#fnref:2" class="footnote-back-ref">↩</a></p></li> <li id="fn:3"><p>"The LTP". Retrieved 10 December 2024. <a href="https://imedea.uib-csic.es/mmg/ltp/#LTP" target="_blank">https://imedea.uib-csic.es/mmg/ltp/#LTP</a> <a href="#fnref:3" class="footnote-back-ref">↩</a></p></li> <li id="fn:4"><p>"LTP_all tree in newick format". Retrieved 10 December 2024. <a href="https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree" target="_blank">https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree</a> <a href="#fnref:4" class="footnote-back-ref">↩</a></p></li> <li id="fn:5"><p>"LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024. <a href="https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf" target="_blank">https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf</a> <a href="#fnref:5" class="footnote-back-ref">↩</a></p></li> <li id="fn:6"><p>"GTDB release 09-RS220". Genome Taxonomy Database. Retrieved 10 May 2024. <a href="https://gtdb.ecogenomic.org/about#4%7C" target="_blank">https://gtdb.ecogenomic.org/about#4%7C</a> <a href="#fnref:6" class="footnote-back-ref">↩</a></p></li> <li id="fn:7"><p>"bac120_r220.sp_labels". Genome Taxonomy Database. Retrieved 10 May 2024. <a href="https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree" target="_blank">https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree</a> <a href="#fnref:7" class="footnote-back-ref">↩</a></p></li> <li id="fn:8"><p>"Taxon History". Genome Taxonomy Database. Retrieved 10 May 2024. <a href="https://gtdb.ecogenomic.org/taxon_history/" target="_blank">https://gtdb.ecogenomic.org/taxon_history/</a> <a href="#fnref:8" class="footnote-back-ref">↩</a></p></li> </ol>