Dijkstra was born on a small island in Indonesia but spent his formative years in the Netherlands. His father had been interned in a Japanese concentration camp and died soon after World War II. Dijkstra later moved to the United States, where he attended San Diego State University. After completing his undergraduate studies, Dijkstra earned his Ph.D. in Comparative Literature from the University of California, Berkeley.
Dijkstra is married to Sandra Dijkstra, a prominent literary agent known for representing numerous acclaimed authors. He lives in Del Mar, California.
Dijkstra and his wife Sandra Dijkstra are avid collectors of art, literary works, and music; in 2023, they made a significant gift to Stanford University, donating a major collection of materials related to Black music, including rare recordings on vinyl disc documenting the history of Black music.
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