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List of open-source bioinformatics software
open-in-new
<p> This is a list of computer <a href="/facts/Software/RP79lVSW">software</a> which is made for <a href="/facts/Bioinformatics/D5x2L8ee">bioinformatics</a> and released under <a href="/facts/Open-source_software/HzTaB8E9">open-source software</a> licenses with articles in Wikipedia. </p> <table><tbody><tr><th>Software</th><th>Description</th><th>Platform</th><th>License</th><th>Developer</th></tr><tr><td>.NET Bio</td><td>Language-neutral toolkit built using the Microsoft 4.0 .NET Framework to help developers, researchers, and scientists</td><td><a href="/facts/.NET_Framework/J6QDAUhP">.NET Framework</a></td><td><a href="/facts/Apache_License/5AeIjas8">Apache</a></td><td>Collaborative project</td></tr><tr><td><a href="/facts/AMPHORA/SPDdqcHL">AMPHORA</a></td><td><a href="/facts/Metagenomics/GWFeMd7z">Metagenomics</a> analysis software</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a></td><td><a href="/facts/GNU_General_Public_License/S75KhLSX">GPL</a></td><td><a href="/facts/Jonathan_Eisen/5VsHpXG8">Jonathan Eisen</a></td></tr><tr><td><a href="/facts/Anduril_(workflow_engine)/ePzjrt8b">Anduril</a></td><td>Component-based <a href="/facts/Workflow/Ig8zvxF2">workflow</a> framework for data analysis</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/GNU_General_Public_License/S75KhLSX">GPL</a></td><td><a href="/facts/University_of_Helsinki/auoyYhDV">University of Helsinki</a></td></tr><tr><td><a href="/facts/Apache_Taverna/Y2v63Cax">Apache Taverna</a></td><td>Written in <a href="/facts/Java_(programming_language)/9ScgFyAL">Java</a></td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td>Apache License 2.0</td><td><a href="/facts/The_Apache_Software_Foundation/Xl9Tt9lE">Apache Software Foundation</a>, <a href="/facts/MyGrid/KjKhIWys">myGrid</a></td></tr><tr><td><a href="/facts/Ascalaph_Designer/GJnlfVQq">Ascalaph Designer</a></td><td>Computer program for general purpose molecular modelling for molecular design and simulations.</td><td><a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/GPLv2/S75KhLSX">GPLv2</a></td><td>Agile Molecule</td></tr><tr><td><a href="/facts/AutoDock/7pR0Dj9T">AutoDock</a></td><td>Suite of automated docking tools</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/Mac_OS_X/Y93vVpTm">Mac OS X</a>, <a href="/facts/SGI_IRIX/vK9rSatM">SGI IRIX</a>, and <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/GNU_General_Public_License/S75KhLSX">GPL</a></td><td><a href="/facts/Scripps_Research/aAlctR0k">Scripps Research</a></td></tr><tr><td><a href="/facts/Avogadro_(software)/qp4U7WzA">Avogadro</a></td><td><a href="/facts/C%2B%2B/Et0F2qn9">C++</a> (<a href="/facts/Qt_(software)/gVhwlQnJ">Qt</a>) based molecule editor and visualizer for in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas.</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Unix/0pNL2seI">Unix</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td>3-Clause <a href="/facts/BSD_licenses/XLtmLp5x">BSD License</a></td><td><a href="https://www.openchemistry.org/projects/">Open Chemistry Project</a></td></tr><tr><td><a href="/facts/BED_(file_format)/oRyX6L2L">BEDtools</a></td><td>"Genome arithmetic"—manipulation of coordinate sets and the extraction of sequences from a BED file.</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a></td><td><a href="/facts/MIT_License/8llAQtlk">MIT</a></td><td><a href="http://quinlanlab.org/">QuinlanLab</a>, <a href="/facts/University_of_Utah/0lhlnv7c">University of Utah</a></td></tr><tr><td><a href="/facts/Bioclipse/BevNhVk0">Bioclipse</a></td><td>Visual platform for <a href="/facts/Cheminformatics/BwBkT11c">chemo</a>- and <a href="/facts/Bioinformatics/D5x2L8ee">bioinformatics</a> based on the <a href="/facts/Eclipse_(software)/YoqHVjas">Eclipse</a> Rich Client Platform (RCP)</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/Eclipse_Public_License/jQvqgpN8">Eclipse Public</a></td><td>The Bioclipse Project</td></tr><tr><td><a href="/facts/Bioconductor/SQyvk4TM">Bioconductor</a></td><td><a href="/facts/R_(programming_language)/LSrkr8K8">R (programming language)</a> language toolkit</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/Artistic_License/9vHBm47P">Artistic</a> 2.0</td><td><a href="/facts/Fred_Hutchinson_Cancer_Research_Center/lRer5Qo1">Fred Hutchinson Cancer Research Center</a></td></tr><tr><td><a href="/facts/BioJava/337yp2fF">BioJava</a></td><td><a href="/facts/Java_(programming_language)/9ScgFyAL">Java</a> library functions for manipulating sequences, protein structures, file parsers, CORBA interoperability, Distributed Annotation System (DAS), access to AceDB, dynamic programming, and simple statistical routines</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/GNU_Lesser_General_Public_License/AXwkz9x3">LGPL</a> v2.1</td><td><a href="/facts/Open_Bioinformatics_Foundation/DhrQKU6g">Open Bioinformatics Foundation</a></td></tr><tr><td><a href="/facts/BioJS/lTu1q9jY">BioJS</a></td><td><a href="/facts/JavaScript/XhhIIEsl">JavaScript</a> library of components to visualize biological data</td><td><a href="/facts/Web_browser/2pfyymLs">Web browser</a></td><td><a href="/facts/Apache_License/5AeIjas8">Apache</a></td><td><a href="http://blog.biojs.net/aboutme/">BioJS Community</a></td></tr><tr><td><a href="/facts/BioMOBY/sq7VyPlH">BioMOBY</a></td><td>Registry of <a href="/facts/Web_services/qxrwqB3D">web services</a></td><td><a href="/facts/Web_browser/2pfyymLs">Web browser</a></td><td><a href="/facts/Artistic_License/9vHBm47P">Artistic</a></td><td><a href="/facts/Open_Bioinformatics_Foundation/DhrQKU6g">Open Bioinformatics Foundation</a></td></tr><tr><td><a href="/facts/BioPerl/WXlJn3W1">BioPerl</a></td><td><a href="/facts/Perl/fx31kjlT">Perl</a> language toolkit</td><td><a href="/facts/Cross-platform/16zqdvNR">Cross-platform</a></td><td><a href="/facts/Artistic_License/9vHBm47P">Artistic</a>, <a href="/facts/GNU_General_Public_License/S75KhLSX">GPL</a></td><td><a href="/facts/Open_Bioinformatics_Foundation/DhrQKU6g">Open Bioinformatics Foundation</a></td></tr><tr><td><a href="/facts/BioPHP/xyvpVCDs">BioPHP</a></td><td><a href="/facts/PHP/vU6YRJX0">PHP</a> language toolkit with classes for DNA and protein sequence analysis, alignment, database parsing, and other bioinformatics tools</td><td><a href="/facts/Cross-platform/16zqdvNR">Cross-platform</a></td><td><a href="/facts/GNU_General_Public_License/S75KhLSX">GPL</a> v2</td><td><a href="/facts/Open_Bioinformatics_Foundation/DhrQKU6g">Open Bioinformatics Foundation</a></td></tr><tr><td><a href="/facts/Biopython/G0BjqB51">Biopython</a></td><td><a href="/facts/Python_(programming_language)/YbuGqofa">Python</a> language toolkit</td><td><a href="/facts/Cross-platform/16zqdvNR">Cross-platform</a></td><td>Biopython</td><td><a href="/facts/Open_Bioinformatics_Foundation/DhrQKU6g">Open Bioinformatics Foundation</a></td></tr><tr><td><a href="/facts/BioRuby/rFBQ8jf9">BioRuby</a></td><td><a href="/facts/Ruby_(programming_language)/BeYSaPSR">Ruby</a> language toolkit</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/GNU_General_Public_License/S75KhLSX">GPL</a> v2 or <a href="/facts/Ruby_license/1wLWPzKe">Ruby</a></td><td><a href="/facts/Open_Bioinformatics_Foundation/DhrQKU6g">Open Bioinformatics Foundation</a></td></tr><tr><td><a href="/facts/BLAST_(biotechnology)/uWufGxFH">BLAST</a></td><td>Algorithm and program for comparing primary biological sequence information, including DNA and protein sequences.</td><td><a href="/facts/Cross-platform/16zqdvNR">Cross-platform</a></td><td><a href="/facts/Public_domain/YWKMDKw4">Public domain</a></td><td><a href="/facts/National_Center_for_Biotechnology_Information/6Xj5wCbu">National Center for Biotechnology Information</a></td></tr><tr><td><a href="/facts/CP2K/g84Xktgq">CP2K</a></td><td>Perform atomistic simulations of solid state, liquid, molecular and biological systems, written in Fortran 2003.</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/GNU_General_Public_License/S75KhLSX">GPL</a> and <a href="/facts/GNU_Lesser_General_Public_License/AXwkz9x3">LGPL</a></td><td>Free open source GNU GPLv2 or later</td></tr><tr><td><a href="/facts/EMBOSS/91ddC2or">EMBOSS</a></td><td>Suite of packages for sequencing, searching, etc. written in <a href="/facts/C_(programming_language)/Ky2No763">C</a></td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Unix/0pNL2seI">Unix</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/GNU_General_Public_License/S75KhLSX">GPL</a> and <a href="/facts/GNU_Lesser_General_Public_License/AXwkz9x3">LGPL</a></td><td>Collaborative project</td></tr><tr><td><a href="/facts/Galaxy_(computational_biology)/sQbA61Qy">Galaxy</a></td><td><a href="/facts/Scientific_workflow_system/HkvT6FTF">Scientific workflow</a> and <a href="/facts/Data_integration/BU47JR28">data integration</a> system</td><td><a href="/facts/Unix-like/YAKrAxzd">Unix-like</a></td><td><a href="/facts/Academic_Free_License/kbPBSo3W">Academic Free</a></td><td>Collaborative project</td></tr><tr><td><a href="/facts/GenePattern/sh0LuEw9">GenePattern</a></td><td><a href="/facts/Scientific_workflow_system/HkvT6FTF">Scientific workflow system</a> that provides access to hundreds of genomic analysis tools</td><td><a href="/facts/Unix-like/YAKrAxzd">Unix-like</a> (public server); <a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/MIT_License/8llAQtlk">MIT</a></td><td><a href="/facts/Broad_Institute/RchJRWLN">Broad Institute</a>, <a href="/facts/University_of_California,_San_Diego/srMClpNv">UC San Diego</a></td></tr><tr><td><a href="/facts/Geworkbench/xyXsRmal">Geworkbench</a></td><td>Genomic <a href="/facts/Data_integration/BU47JR28">data integration</a> platform</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td>GeWorkbench License</td><td><a href="/facts/Columbia_University/Hlf1gw53">Columbia University</a></td></tr><tr><td><a href="/facts/Generic_Model_Organism_Database/gcMmv9gc">GMOD</a></td><td>Toolkit to address many common challenges at biological databases</td><td><a href="/facts/Unix-like/YAKrAxzd">Unix-like</a> (server), <a href="/facts/Web_browser/2pfyymLs">Web browser</a> (client)</td><td>Varies depending on tool</td><td>Collaborative project</td></tr><tr><td><a href="/facts/GenGIS/6vQyt1Gd">GenGIS</a></td><td>Application that allows combining digital map data with information about biological sequences collected from the environment</td><td><a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a></td><td><a href="/facts/GNU_General_Public_License/S75KhLSX">GPL</a></td><td>Collaborative project</td></tr><tr><td><a href="/facts/GenoCAD/9h3kKjt5">GenoCAD</a></td><td>A computer-assisted design (CAD) tool for synthetic biology, used to design genetic constructs based on grammar rules.</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td>Apache License 2.0</td><td>GenoCAD Team (<a href="/facts/Biocomplexity_Institute_of_Virginia_Tech/RKbev6JM">Virginia Bioinformatics Institute</a>)</td></tr><tr><td><a href="/facts/Genomespace/rabUsKFb">Genomespace</a></td><td>Centralized web application that provides data format transformations and facilitates connections with other bioinformatics tools</td><td><a href="/facts/Web_browser/2pfyymLs">Web browser</a></td><td><a href="/facts/GNU_Lesser_General_Public_License/AXwkz9x3">LGPL</a></td><td><a href="/facts/Broad_Institute/RchJRWLN">Broad Institute</a>, collaborative project</td></tr><tr><td><a href="/facts/GENtle_(software)/AgP1l9d5">GENtle</a></td><td>An equivalent to the proprietary <a href="/facts/Vector_NTI/CjWDuGrl">Vector NTI</a>, a tool to analyze and edit <a href="/facts/DNA/nB89Iauz">DNA</a> sequence files</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/GNU_General_Public_License/S75KhLSX">GPL</a></td><td><a href="/facts/Magnus_Manske/XwSKMqIU">Magnus Manske</a></td></tr><tr><td>gget</td><td>Efficient querying of genomic reference databases including <a href="/facts/UniProt/lfDDHjAl">UniProt</a>, <a href="/facts/National_Center_for_Biotechnology_Information/6Xj5wCbu">National Center for Biotechnology Information</a>, and <a href="/facts/Ensembl_genome_database_project/dEhjvNaA">Ensembl genome database project</a></td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/BSD_licenses/XLtmLp5x">BSD</a></td><td>Laura Luebbert and <a href="/facts/Lior_Pachter/J0P5FjvY">Lior Pachter</a></td></tr><tr><td><a href="/facts/GROMACS/k9uuIs0e">GROMACS</a></td><td>Molecular dynamics package mainly designed for simulations of proteins, lipids and nucleic acids.</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/Common_Public_License/M12x3DgF">Common Public</a> 1.0</td><td>GenoViz</td></tr><tr><td><a href="/facts/Integrated_Genome_Browser/g5cKB7dp">Integrated Genome Browser</a></td><td><a href="/facts/Java_(software_platform)/fpn6x8WL">Java</a>-based desktop <a href="/facts/Genome_browser/AyNFP4sM">genome browser</a></td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/Common_Public_License/M12x3DgF">Common Public</a> 1.0</td><td>GenoViz</td></tr><tr><td><a href="/facts/InterMine/w3SeV9tA">InterMine</a></td><td>Extensive data warehouse system for the analysis and integration of biological datasets written in Java and JavaScript</td><td><a href="/facts/Cross-platform/16zqdvNR">Cross-platform</a></td><td><a href="/facts/GNU_Lesser_General_Public_License/AXwkz9x3">LGPL</a></td><td><a href="/facts/University_of_Cambridge/0la7aX9o">University of Cambridge</a></td></tr><tr><td><a href="/facts/LabKey_Server/Qk8FrrlY">LabKey Server</a></td><td>Software platform, allows organizations to integrate, analyze, and share complex biomedical data</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/Apache_License/5AeIjas8">Apache</a></td><td>LabKey Software Foundation</td></tr><tr><td><a href="/facts/LAMMPS/DgKHIKCw">LAMMPS</a></td><td>Molecular dynamics program written in <a href="/facts/C%2B%2B/Et0F2qn9">C++</a></td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/Apache_License/5AeIjas8">Apache</a></td><td>Sandia National Laboratories.</td></tr><tr><td><a href="/facts/Mothur/xEhGd71D">mothur</a></td><td>Software for analysis of <a href="/facts/16S_ribosomal_RNA/XCgSahoy">16S rRNA</a> gene amplicon sequence data</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/GNU_General_Public_License/S75KhLSX">GPL</a></td><td><a href="/facts/University_of_Michigan/6e1Ea5xh">University of Michigan</a></td></tr><tr><td><a href="/facts/Nextflow/N07bQ5IS">Nextflow</a></td><td>A workflow management system used for building and running scalable and reproducible bioinformatics pipelines, especially in cloud and high-performance computing environments.</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/Apache_License/5AeIjas8">Apache License</a> 2.0</td><td>Nextflow Team</td></tr><tr><td><a href="/facts/PathVisio/3V4VTT6E">PathVisio</a></td><td>Desktop software for drawing, analyzing, and visualizing biological pathways</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/Apache_License/5AeIjas8">Apache</a> 2.0</td><td><a href="/facts/Maastricht_University/al56R88q">Maastricht University</a></td></tr><tr><td><a href="/facts/Orange_(software)/cWYD2XzI">Orange</a></td><td>Component-based <a href="/facts/Data_mining/AH53q5ac">data mining</a> and <a href="/facts/Machine_learning/e0w0XJTu">machine learning</a> software suite written in C++, featuring a visual programming front-end for <a href="/facts/Exploratory_data_analysis/8hvnf7JS">exploratory data analysis</a> and <a href="/facts/Interactive_data_visualization/ET1lSjFa">interactive visualization</a>, and <a href="/facts/Python_(programming_language)/YbuGqofa">Python</a> bindings and libraries for scripting</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/GNU_General_Public_License/S75KhLSX">GPL</a></td><td><a href="/facts/University_of_Ljubljana/kUsEhRLQ">University of Ljubljana</a></td></tr><tr><td><a href="/facts/SAMtools/WFzNmNVs">SAMtools</a></td><td>Utilities for interacting with high-throughput sequencing data and alignments in sam/bam format</td><td><a href="/facts/Unix/0pNL2seI">Unix</a>/<a href="/facts/Linux/9FvCKSTq">Linux</a></td><td><a href="/facts/MIT_License/8llAQtlk">MIT</a></td><td>Collaborative project</td></tr><tr><td><a href="/facts/Short_Oligonucleotide_Analysis_Package/bzFYAN1h">SOAP Suite</a></td><td>Suite of tools for assembly, alignment, and analysis of short read <a href="/facts/Next-Generation_Sequencing/hsPsNCQW">next generation sequencing</a> data</td><td><a href="/facts/Unix/0pNL2seI">Unix</a>/<a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a></td><td><a href="/facts/GNU_General_Public_License/S75KhLSX">GPL</a></td><td><a href="/facts/BGI_Group/IEjfX8lm">BGI</a></td></tr><tr><td><a href="/facts/Staden_Package/6NkI35Lt">Staden Package</a></td><td>Sequence assembly, editing, and analysis, mainly consisting of gap4, gap5, and spin. Written in C, C++, Fortran and Tcl.</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/BSD_licenses/XLtmLp5x">BSD</a></td><td><a href="/facts/Wellcome_Trust_Sanger_Institute/uQchlx8p">Wellcome Trust Sanger Institute</a>, <a href="/facts/Medical_Research_Council_(United_Kingdom)/gFd1kR2B">Medical Research Council</a></td></tr><tr><td><a href="/facts/Taverna_workbench/Y2v63Cax">Taverna workbench</a></td><td>Tool to design and execute workflows</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/GNU_Lesser_General_Public_License/AXwkz9x3">LGPL</a></td><td><a href="/facts/MyGrid/KjKhIWys">myGrid</a></td></tr><tr><td><a href="/facts/T-REX_(web_server)/XsXvju0f">T-REX (web server)</a></td><td>Inference, validation and visualization of phylogenetic trees and phylogenetic networks</td><td><a href="/facts/Web_browser/2pfyymLs">Web browser</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/GNU_General_Public_License/S75KhLSX">GNU (GPL)</a> v3</td><td><a href="/facts/Universit%C3%A9_du_Qu%C3%A9bec_%C3%A0_Montr%C3%A9al/39GlPcIP">Université du Québec à Montréal</a></td></tr><tr><td><a href="/facts/UGENE/mjzAH719">UGENE</a></td><td>Integrated bioinformatics tools, written in <a href="/facts/C%2B%2B/Et0F2qn9">C++</a> (<a href="/facts/Qt_(software)/gVhwlQnJ">Qt</a>)</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a></td><td><a href="/facts/GNU_General_Public_License/S75KhLSX">GPL</a> 2</td><td>Unipro</td></tr><tr><td><a href="/facts/Unipept/pQSt7SgI">Unipept</a></td><td>Metaproteomics biodiversity analysis written in Ruby and JavaScript</td><td><a href="/facts/Web_browser/2pfyymLs">Web browser</a></td><td><a href="/facts/MIT_License/8llAQtlk">MIT</a></td><td><a href="/facts/Ghent_University/dcmAef7x">Ghent University</a></td></tr><tr><td><a href="/facts/VOTCA/KsaCP6mL">VOTCA</a></td><td>A Coarse-grained modeling package for molecular dynamics, written in C++, Perl, BASH</td><td><a href="/facts/Linux/9FvCKSTq">Linux</a>, <a href="/facts/MacOS/Y93vVpTm">macOS</a>, <a href="/facts/Microsoft_Windows/bwhAhuSL">Windows</a>, any other Unix variety</td><td><a href="/facts/Apache_License_2.0/5AeIjas8">Apache License 2.0</a></td><td>Max Planck Institute for Polymer Research</td></tr></tbody></table>