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Reference.org
List of functional connectivity software
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<p> <a href="/facts/Functional_connectivity/yq9Qk2Yg">Functional connectivity</a> software is used to study functional properties of the <a href="/facts/Connectome/X5tjEwwl">connectome</a> using <a href="/facts/Functional_Magnetic_Resonance_Imaging/GIayRTAL">functional Magnetic Resonance Imaging (fMRI)</a> data in the <a href="/facts/Resting_state/yq9Qk2Yg">resting state</a> and during tasks. To access many of these software applications visit the <a href="/facts/NIH/G3Eytfcc">NIH</a> funded <a href="/facts/Neuroimaging_Informatics_Tools_and_Resources_Clearinghouse/LNuNIN1e">Neuroimaging Informatics Tools and Resources Clearinghouse (NITRC)</a> site. </p> <table><tbody><tr><th>Name</th><th>Description</th><th>Programming language</th><th>Is part of / requires</th><th>Developer/Organization</th></tr><tr><td><a href="/facts/CONN_(functional_connectivity_toolbox)/yFTvYcj7">CONN</a></td><td>Functional connectivity analysis and display tool</td><td><a href="/facts/Matlab/qPjLISCk">Matlab</a></td><td><a href="/facts/Statistical_parametric_mapping/NDJ7qx6M">SPM</a></td><td>McGovern Institute for Brain Research, Massachusetts Institute of Technology: MIT</td></tr><tr><td><a href="/facts/Dynamic_causal_modelling/yTWrblEf">DCM</a></td><td>Dynamic Causal Modelling analysis</td><td><a href="/facts/Matlab/qPjLISCk">Matlab</a></td><td><a href="/facts/Statistical_parametric_mapping/NDJ7qx6M">SPM</a></td><td>Wellcome Trust Centre for Neuroimaging, University College London</td></tr><tr><td><a href="/facts/AFNI/uSBaTcs1">FATCAT</a></td><td>Functional and tractographic connectivity analysis</td><td><a href="/facts/C_(programming_language)/Ky2No763">C</a></td><td><a href="/facts/AFNI/uSBaTcs1">AFNI</a></td><td>Scientific and Statistical Computing Core, National Institute of Mental Health: NIMH</td></tr><tr><td><a href="/facts/Freesurfer/wV2mL58c">FSFC</a></td><td>Seed-based functional connectivity analysis</td><td><a href="/facts/Shell_script/NE7YvsBD">Shell</a></td><td><a href="/facts/FreeSurfer/wV2mL58c">FreeSurfer</a></td><td>Martinos Center for Biomedical Imaging</td></tr><tr><td><a href="/facts/FMRIB_Software_Library/hCMGVllw">MELODIC</a></td><td>Independent component analysis</td><td><a href="/facts/C_(programming_language)/Ky2No763">C</a></td><td><a href="/facts/FMRIB_Software_Library/hCMGVllw">FSL</a></td><td>Functional Magnetic Resonance Imaging of the Brain Analysis Group, Oxford University</td></tr></tbody></table>