NeXML format - Reference.org

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Filename extensions .nexml

Internet media type text/x-nexml+xml

Developed by Rutger A. Vos, et al.

Initial release 1 July 2012 (8 years ago)

Type of format bioinformatics

Extended from XML

Open format? Yes

Additional information

NeXML format

File format

NeXML is an exchange standard for representing phyloinformatic data. It was inspired by the widely used Nexus file format but uses XML to produce a more robust format for rich phylogenetic data. Advantages include syntax validation, semantic annotation, and web services. The format is broadly supported and has libraries in many popular programming languages for bioinformatics.

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External links

References

Vos, Rutger A.; Balhoff, James P.; Caravas, Jason A.; Holder, Mark T.; Lapp, Hilmar; Maddison, Wayne P.; Midford, Peter E.; Priyam, Anurag; Sukumaran, Jeet (2012-07-01). "NeXML: Rich, Extensible, and Verifiable Representation of Comparative Data and Metadata". Systematic Biology. 61 (4): 675–689. doi:10.1093/sysbio/sys025. ISSN 1063-5157. PMC 3376374. PMID 22357728. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3376374 ↩