The Synthetic Biology Open Language (SBOL) is a proposed data standard for exchanging synthetic biology designs between software packages. It has been under development by the SBOL Developers Group since 2008. This group aims to develop the standard in a way that is open and democratic in order to include as many interests as possible and to avoid domination by a single company. The group also aims to develop and improve the design standard over time as the field of synthetic biology reflects this development.
A graphical modeling language called SBOL Visual has also been created to visualize SBOL designs.
Releases
| Version | Date |
|---|---|
| 1.0 | November 2011 |
| 1.1 | October 2012 |
| 2.0 | July 2015 |
| 2.1.0 | October 20165 |
| 3.0 | September 2020 |
References
"The Synthetic Biology Open Language (SBOL)". http://sbolstandard.org/ ↩
Galdzicki, Michal; Clancy, Kevin P; Oberortner, Ernst; Pocock, Matthew; Quinn, Jacqueline Y; Rodriguez, Cesar A; Roehner, Nicholas; Wilson, Mandy L; Adam, Laura; Anderson, J Christopher; Bartley, Bryan A; Beal, Jacob; Chandran, Deepak; Chen, Joanna; Densmore, Douglas; Endy, Drew; Grünberg, Raik; Hallinan, Jennifer; Hillson, Nathan J; Johnson, Jeffrey D; Kuchinsky, Allan; Lux, Matthew; Misirli, Goksel; Peccoud, Jean; Plahar, Hector A; Sirin, Evren; Stan, Guy-Bart; Villalobos, Alan; Wipat, Anil; Gennari, John H; Myers, Chris J; Sauro, Herbert M (6 June 2014). "The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology". Nature Biotechnology. 32 (6): 545–550. doi:10.1038/nbt.2891. PMID 24911500. https://doi.org/10.1038%2Fnbt.2891 ↩
"Governance | the Synthetic Biology Open Language (SBOL)". sbolstandard.org. Archived from the original on 2015-12-01. https://web.archive.org/web/20151201083024/http://sbolstandard.org/development/gov/ ↩
Quinn, Jacqueline Y.; Cox, Robert Sidney; Adler, Aaron; Beal, Jacob; Bhatia, Swapnil; Cai, Yizhi; Chen, Joanna; Clancy, Kevin; Galdzicki, Michal; Hillson, Nathan J.; Le Novère, Nicolas; Maheshwari, Akshay J.; McLaughlin, James Alastair; Myers, Chris J.; P, Umesh; Pocock, Matthew; Rodriguez, Cesar; Soldatova, Larisa; Stan, Guy-Bart V.; Swainston, Neil; Wipat, Anil; Sauro, Herbert M. (3 December 2015). "SBOL Visual: A Graphical Language for Genetic Designs". PLOS Biology. 13 (12): e1002310. doi:10.1371/journal.pbio.1002310. PMC 4669170. PMID 26633141. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4669170 ↩
Beal, Jacob; Cox, Robert Sidney; Grünberg, Raik; McLaughlin, James; Nguyen, Tramy; Bartley, Bryan; Bissell, Michael; Choi, Kiri; Clancy, Kevin; MacKlin, Chris; Madsen, Curtis; Misirli, Goksel; Oberortner, Ernst; Pocock, Matthew; Roehner, Nicholas; Samineni, Meher; Zhang, Michael; Zhang, Zhen; Zundel, Zach; Gennari, John H.; Myers, Chris; Sauro, Herbert; Wipat, Anil (2016). "Synthetic Biology Open Language (SBOL) Version 2.1.0". Journal of Integrative Bioinformatics. 13 (3): 291. doi:10.1515/jib-2016-291. hdl:1983/5e0058e9-0cfa-40a5-b0b8-6195f61ff524. PMID 28187407. https://doi.org/10.1515%2Fjib-2016-291 ↩