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Credible interval
Concept in Bayesian statistics

In Bayesian statistics, a credible interval is an interval that characterizes a probability distribution such that the parameter has a specified probability of lying within it. For example, if the probability that a parameter μ lies between 35 and 45 is γ = 0.95, then this defines a 95% credible interval. Credible intervals typically describe posterior probability or predictive probability distributions and generalize to credible sets or regions. They are the Bayesian counterpart to confidence intervals in frequentist statistics, differing in interpretation, use of prior distributions, and treatment of parameters and interval bounds.

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Definitions

Credible sets are not unique, as any given probability distribution has an infinite number of γ {\displaystyle \gamma } -credible sets, i.e. sets of probability γ {\displaystyle \gamma } . For example, in the univariate case, there are multiple definitions for a suitable interval or set:

  • The smallest credible interval (SCI), sometimes also called the highest density interval. This interval necessarily contains the median whenever γ ≥ 0.5 {\displaystyle \gamma \geq 0.5} . When the distribution is unimodal, this interval also contains the mode.
  • The smallest credible set (SCS), sometimes also called the highest density region. For a multimodal distribution, this is not necessarily an interval as it can be disconnected. This set always contains the mode.
  • A quantile-based credible interval, which is computed by taking the inter-quantile interval [ q δ , q δ + γ ] {\displaystyle [q_{\delta },q_{\delta +\gamma }]} for some predefined δ ∈ [ 0 , 1 − γ ] {\displaystyle \delta \in [0,1-\gamma ]} . For instance, the median credible interval (MCI) of probability γ {\displaystyle \gamma } is the interval where the probability of being below the interval is as likely as being above it, that is to say the interval [ q ( 1 − γ ) / 2 , q ( 1 + γ ) / 2 ] {\displaystyle [q_{(1-\gamma )/2},q_{(1+\gamma )/2}]} . It is sometimes also called the equal-tailed interval, and it always contains the median. Other quantile-based credible intervals can be defined, such as the lowest credible interval (LCI) which is [ q 0 , q γ ] {\displaystyle [q_{0},q_{\gamma }]} , or the highest credible interval (HCI) which is [ q 1 − γ , q 1 ] {\displaystyle [q_{1-\gamma },q_{1}]} . These intervals may be more suited for bounded variables.

One may also define an interval for which the mean is the central point, assuming that the mean exists.

γ {\displaystyle \gamma } -Smallest Credible Sets ( γ {\displaystyle \gamma } -SCS) can easily be generalized to the multivariate case, and are bounded by probability density contour lines.4 They always contain the mode, but not necessarily the mean, the coordinate-wise median, nor the geometric median.

Credible intervals can also be estimated through the use of simulation techniques such as Markov chain Monte Carlo.5

Contrasts with confidence interval

A frequentist 95% confidence interval means that with a large number of repeated samples, 95% of such calculated confidence intervals would include the true value of the parameter. In frequentist terms, the parameter is fixed (cannot be considered to have a distribution of possible values) and the confidence interval is random (as it depends on the random sample).

Bayesian credible intervals differ from frequentist confidence intervals by two major aspects:

  • credible intervals are intervals whose values have a (posterior) probability density, representing the plausibility that the parameter has those values, whereas confidence intervals regard the population parameter as fixed and therefore not the object of probability. Within confidence intervals, confidence refers to the randomness of the very confidence interval under repeated trials, whereas credible intervals analyse the uncertainty of the target parameter given the data at hand.
  • credible intervals and confidence intervals treat nuisance parameters in radically different ways.

For the case of a single parameter and data that can be summarised in a single sufficient statistic, it can be shown that the credible interval and the confidence interval coincide if the unknown parameter is a location parameter (i.e. the forward probability function has the form P r ( x | μ ) = f ( x − μ ) {\displaystyle \mathrm {Pr} (x|\mu )=f(x-\mu )} ), with a prior that is a uniform flat distribution;6 and also if the unknown parameter is a scale parameter (i.e. the forward probability function has the form P r ( x | s ) = f ( x / s ) {\displaystyle \mathrm {Pr} (x|s)=f(x/s)} ), with a Jeffreys' prior P r ( s | I ) ∝ 1 / s {\displaystyle \mathrm {Pr} (s|I)\;\propto \;1/s} 7 — the latter following because taking the logarithm of such a scale parameter turns it into a location parameter with a uniform distribution. But these are distinctly special (albeit important) cases; in general no such equivalence can be made.

Further reading

  • Bolstad, William M.; Curran, James M. (2016). "Comparing Bayesian and Frequentist Inferences for Mean". Introduction to Bayesian Statistics (Third ed.). John Wiley & Sons. pp. 237–253. ISBN 978-1-118-09156-2.

References

  1. Edwards, Ward; Lindman, Harold; Savage, Leonard J. (1963). "Bayesian statistical inference in psychological research". Psychological Review. 70 (3): 193–242. doi:10.1037/h0044139. /wiki/Doi_(identifier)

  2. Lee, P.M. (1997) Bayesian Statistics: An Introduction, Arnold. ISBN 0-340-67785-6 /wiki/ISBN_(identifier)

  3. VanderPlas, Jake. "Frequentism and Bayesianism III: Confidence, Credibility, and why Frequentism and Science do not Mix | Pythonic Perambulations". jakevdp.github.io. https://jakevdp.github.io/blog/2014/06/12/frequentism-and-bayesianism-3-confidence-credibility/

  4. O'Hagan, A. (1994) Kendall's Advanced Theory of Statistics, Vol 2B, Bayesian Inference, Section 2.51. Arnold, ISBN 0-340-52922-9 /wiki/ISBN_(identifier)

  5. Chen, Ming-Hui; Shao, Qi-Man (1 March 1999). "Monte Carlo Estimation of Bayesian Credible and HPD Intervals". Journal of Computational and Graphical Statistics. 8 (1): 69–92. doi:10.1080/10618600.1999.10474802. /wiki/Doi_(identifier)

  6. Jaynes, E. T. (1976). "Confidence Intervals vs Bayesian Intervals", in Foundations of Probability Theory, Statistical Inference, and Statistical Theories of Science, (W. L. Harper and C. A. Hooker, eds.), Dordrecht: D. Reidel, pp. 175 et seq http://bayes.wustl.edu/etj/articles/confidence.pdf

  7. Jaynes, E. T. (1976). "Confidence Intervals vs Bayesian Intervals", in Foundations of Probability Theory, Statistical Inference, and Statistical Theories of Science, (W. L. Harper and C. A. Hooker, eds.), Dordrecht: D. Reidel, pp. 175 et seq http://bayes.wustl.edu/etj/articles/confidence.pdf